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Fortmat Supplementary Files to 10x (separate files).

Source: R/GEO.R
ExtractGEOExpSupp10xSingle.Rd

Fortmat Supplementary Files to 10x (separate files).

Usage

ExtractGEOExpSupp10xSingle(
  acce,
  timeout = 3600,
  out.folder = NULL,
  accept.fmt = c("MEX", "h5"),
  gene2feature = TRUE
)

Arguments

acce

GEO accession number.

timeout

Timeout for download.file. Default: 3600.

out.folder

Output folder to save 10x files. Default: NULL (current working directory).

accept.fmt

Vector of accepted 10x output format, MEX (barcode/feature/gene/matrix), h5 (h5/h5.gz). Default: c("MEX", "h5").

gene2feature

Logical value, whether to rename genes.tsv.gz to features.tsv.gz. Default: TURE.