Fortmat Supplementary Files to 10x. — ExtractGEOExpSupp10x • scfetch

Fortmat Supplementary Files to 10x.

Usage

ExtractGEOExpSupp10x(
  acce,
  supp.idx = 1,
  timeout = 3600,
  out.folder = NULL,
  gene2feature = TRUE
)

Arguments

acce: GEO accession number.
supp.idx: The index of supplementary files to download. Default: 1.
timeout: Timeout for download.file. Default: 3600.
out.folder: Output folder to save 10x files. Default: NULL (current working directory).
gene2feature: Logical value, whether to rename genes.tsv.gz to features.tsv.gz. Default: TURE.

Examples

# ExtractGEOExpSupp10x(acce = "GSE200257", out.folder = '/path/to/output')
# ExtractGEOExpSupp10x(acce = "GSE226160", out.folder = '/path/to/output')