Extract Runs with GEO Accession Number or GSM Number.

Extract Runs with GEO Accession Number or GSM Number.

Usage

ExtractRun(gsm = NULL, acce = NULL, platform = NULL, parallel = TRUE, ...)

Arguments

gsm

GSM number. Default: NULL (use acce).

acce

GEO accession number. Default: NULL (use gsm). acce and gsm cannot be both NULL.

platform

Platform information/field. Default: NULL (all platforms).

parallel

Logical value, whether to process GSM parallelly. Default: TRUE.

...

Parameters for getGEO. Used when acce is not NULL.

Value

Dataframe contains GSM and Runs.

Examples

# GSE186003.runs = ExtractRun(acce = "GSE186003", platform = "GPL24247")