Identify TFs from Gene Expression Reults with BART2.

RunBART2(
  genes,
  species = c("Human", "Mouse"),
  bart2.path = NULL,
  projet.name = NULL
)

Arguments

genes	Input gene symbol of human or mouse, can be a set of differentially expressed genes.
species	The species of input gene set. Choose from "Human" and "Mouse". Default: "Human".
bart2.path	BART2 path. Default: NULL (conduct automatic detection).
projet.name	The name of the project used as Query Name. Default: NULL (DEbPeak).

Value

Dataframe contains identified TFs.

Examples

# library(DEbPeak)
# RunBART2(genes = c("SMAD9","FOXO1","MYC","STAT1",'STAT3',"SMAD3"), species = "Human",
#          bart2.path = "~/anaconda3/envs/bart2/bin/bart2")