RunTFEA.RdIdentify TFs from Gene Expression Reults with TFEA.ChIP.
RunTFEA(genes, control.genes)
| genes | Input genes of human, can be a set of differentially expressed genes. |
|---|---|
| control.genes | Input genes of human, can be a set of non-differentially expressed genes. |
Dataframe contains identified TFs with GSEA enrichment score.
# library(DEbPeak) # genes = c("EGLN3","NFYA","ALS2","MYC","ARNT" ) # control.genes = c("MTX1", "OSTF1", "HDAC3", "MTG2", "OPA3") # RunTFEA(genes = genes, control.genes = control.genes)